Description
single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:15674]
Gene Synonyms
CSDP, FLJ10355, SSDP, SSDP1
Location
Chromosome 1: 54,691,105-54,879,152 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 15 transcripts (splice variants), 220 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000371320.3 | SSBP3-002 | 2077 | 388aa | ENSP00000360371.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS591 | Q9BT57 Q9BWW4 Q9NW25 | NM_145716.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000417664.2 | SSBP3-013 | 1666 | 278aa | ENSP00000414361.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9BT57 Q9NW25 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000371319.3 | SSBP3-007 | 1578 | 361aa | ENSP00000360370.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30726 | E9PK49 Q9BT57 Q9BWW4 | NM_001009955.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000357475.4 | SSBP3-001 | 1533 | 368aa | ENSP00000350067.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS590 | Q9BT57 Q9BWW4 | NM_018070.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000525990.1 | SSBP3-014 | 701 | 101aa | ENSP00000431654.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK49 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000444533.1 | SSBP3-005 | 560 | 156aa | ENSP00000405880.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T863 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000326956.7 | SSBP3-012 | 2913 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000426150.1 | SSBP3-004 | 851 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528787.1 | SSBP3-009 | 577 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000448572.1 | SSBP3-015 | 454 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000533946.1 | SSBP3-011 | 431 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528930.1 | SSBP3-010 | 862 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000420121.1 | SSBP3-006 | 593 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533209.1 | SSBP3-008 | 552 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530618.1 | SSBP3-003 | 524 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
