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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF20 ENSG00000155827

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Description

ring finger protein 20, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:10062]

Gene Synonyms

BRE1, BRE1A, FLJ11189, FLJ20382, KAIA2779, hBRE1

Location

Chromosome 9: 104,296,133-104,325,622 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389120.3	RNF20-001	3936	975aa	ENSP00000373772.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35084	C9J0A5 C9JWJ4 C9JXC9 Q5VTR2	NM_019592.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000466817.1	RNF20-006	784	145aa	ENSP00000418924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0A5 C9JWJ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000374819.2	RNF20-007	596	181aa	ENSP00000363952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0A5 C9JWJ4 C9JXC9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479306.1	RNF20-004	387	99aa	ENSP00000419201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWJ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481046.1	RNF20-005	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478072.2	RNF20-008	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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