Description
tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:23704]
Gene Synonyms
C9orf52, FLJ33868
Location
Chromosome 9: 15,163,620-15,307,358 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 11 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000512701.2 | TTC39B-001 | 10483 | 682aa | ENSP00000422496.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6477 | Q5VTQ0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000355694.2 | TTC39B-202 | 3260 | 616aa | ENSP00000347920.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_152574.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000380850.4 | TTC39B-203 | 3221 | 669aa | ENSP00000370231.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55296 | Q5VTQ0 | NM_001168340.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000297615.5 | TTC39B-201 | 3053 | 613aa | ENSP00000297615.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55295 | Q5VTQ0 | NM_001168341.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000507285.1 | TTC39B-007 | 2243 | 517aa | ENSP00000426539.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55294 | Q5VTQ0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000507993.1 | TTC39B-005 | 1950 | 517aa | ENSP00000423392.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55294 | Q5VTQ0 | NM_001168342.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541445.1 | TTC39B-204 | 927 | 194aa | ENSP00000442880.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DVQ6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000506891.1 | TTC39B-004 | 900 | 69aa | ENSP00000427314.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YAJ6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000582994.1 | TTC39B-010 | 567 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505732.1 | TTC39B-006 | 1881 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000380853.1 | TTC39B-003 | 1326 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
