Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ZNF18 ENSG00000154957

.

Description

zinc finger protein 18 [Source:HGNC Symbol;Acc:12969]

Gene Synonyms

HDSG1, KOX11, ZKSCAN6, ZNF535, ZSCAN38, Zfp535

Location

Chromosome 17: 11,880,756-11,900,827 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 7 transcripts (splice variants), 338 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322748.3	ZNF18-002	2767	549aa	ENSP00000315664.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32568	J3KSC1 P17022	NM_144680.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000580306.2	ZNF18-001	2330	549aa	ENSP00000463471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32568	J3KSC1 P17022	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000454073.3	ZNF18-004	2261	548aa	ENSP00000391376.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSC1 P17022	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000580613.1	ZNF18-003	1625	274aa	ENSP00000462296.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96LU8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582607.1	ZNF18-006	729	243aa	ENSP00000462877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000577671.1	ZNF18-007	698	232aa	ENSP00000462383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSA1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000580903.1	ZNF18-005	570	96aa	ENSP00000462416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.