Description
protein phosphatase 4, regulatory subunit 1 [Source:HGNC Symbol;Acc:9320]
Gene Synonyms
MEG1, PP4(Rmeg), PP4R1
Location
Chromosome 18: 9,546,789-9,615,238 reverse strand.
GRCh37:CM000680.1
About this gene
This gene has 29 transcripts (splice variants), 165 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000400556.3 | PPP4R1-001 | 3925 | 950aa | ENSP00000383402.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42412 | B4DID3 J3KRU1 J3KSB0 J3QL26 J3QLA6 Q8TF05 | NM_001042388.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000400555.3 | PPP4R1-002 | 3885 | 933aa | ENSP00000383401.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42413 | B4DID3 J3KRU1 J3KSB0 J3QL26 J3QLA6 Q8TF05 | NM_005134.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000584074.1 | PPP4R1-008 | 625 | 151aa | ENSP00000463459.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRU1 J3KSB0 J3QL26 J3QLA6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000581250.1 | PPP4R1-011 | 578 | 143aa | ENSP00000462399.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRU1 J3KSB0 J3QL26 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582240.1 | PPP4R1-007 | 578 | 190aa | ENSP00000463909.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRU1 J3QQV0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000580745.1 | PPP4R1-006 | 535 | 135aa | ENSP00000463345.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRU1 J3QL26 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000581835.1 | PPP4R1-012 | 379 | 97aa | ENSP00000462161.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRU1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000285124.8 | PPP4R1-003 | 2917 | 84aa | ENSP00000285124.8 | Nonsense mediated decay | F8WAJ9 | - | - | |
| ENST00000580182.1 | PPP4R1-017 | 582 | 75aa | ENSP00000464394.1 | Nonsense mediated decay | J3QRV2 | - | - | |
| ENST00000578875.1 | PPP4R1-018 | 580 | 101aa | ENSP00000462621.1 | Nonsense mediated decay | J3KSS1 | - | - | |
| ENST00000583092.1 | PPP4R1-004 | 554 | 17aa | ENSP00000462485.1 | Nonsense mediated decay | - | - | - | |
| ENST00000580583.1 | PPP4R1-028 | 743 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582933.1 | PPP4R1-013 | 579 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578557.1 | PPP4R1-020 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579638.1 | PPP4R1-014 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579609.1 | PPP4R1-027 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579415.1 | PPP4R1-010 | 563 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000583903.1 | PPP4R1-009 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000584754.1 | PPP4R1-021 | 509 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578178.1 | PPP4R1-019 | 468 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582594.1 | PPP4R1-029 | 2982 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583988.1 | PPP4R1-022 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583438.1 | PPP4R1-023 | 564 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577667.1 | PPP4R1-024 | 560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578010.1 | PPP4R1-025 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577393.1 | PPP4R1-005 | 531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577779.1 | PPP4R1-015 | 481 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000580283.1 | PPP4R1-016 | 378 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578329.1 | PPP4R1-026 | 350 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
