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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTNAP3B ENSG00000154529

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Description

contactin associated protein-like 3B [Source:HGNC Symbol;Acc:32035]

Gene Synonyms

CASPR3, CASPR3B, CNTNAP3A, RP11-138L21.1, RP11-290L7.1

Location

Chromosome 9: 43,684,902-43,924,049 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 11 transcripts (splice variants), 291 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377564.3	CNTNAP3B-001	7939	1288aa	ENSP00000366787.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55312	Q96NU0	NM_001201380.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000276974.6	CNTNAP3B-003	3209	380aa	ENSP00000276974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96NU0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000479351.1	CNTNAP3B-011	2395	605aa	ENSP00000432883.1	Nonsense mediated decay		F2Z2X5	-	-
ENST00000467854.1	CNTNAP3B-007	1238	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476961.1	CNTNAP3B-004	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484254.1	CNTNAP3B-006	742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480466.1	CNTNAP3B-005	473	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491438.1	CNTNAP3B-010	438	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000377561.2	CNTNAP3B-002	5256	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000341990.4	CNTNAP3B-009	2647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489789.2	CNTNAP3B-008	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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