Description
ATP-binding cassette, sub-family A (ABC1), member 5 [Source:HGNC Symbol;Acc:35]
Gene Synonyms
ABC13, ABCA5, EST90625, KIAA1888
Location
Chromosome 17: 67,240,452-67,323,385 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 15 transcripts (splice variants), 217 orthologues, 11 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000392676.3 | ABCA5-001 | 8220 | 1642aa | ENSP00000376443.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11685 | K7EJW6 K7EMV2 K7EPM3 K7EQ50 Q8WWZ7 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392677.2 | ABCA5-201 | 8180 | 1643aa | ENSP00000376444.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ETD3 K7EJW6 K7EMV2 K7EPM3 K7EQ50 | NM_172232.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000588877.1 | ABCA5-004 | 6525 | 1642aa | ENSP00000467882.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11685 | K7EJW6 K7EMV2 K7EPM3 K7EQ50 Q8WWZ7 | NM_018672.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000593153.1 | ABCA5-003 | 3017 | 917aa | ENSP00000467448.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EMV2 K7EPM3 K7EQ50 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000586811.1 | ABCA5-008 | 1948 | 573aa | ENSP00000465351.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJW6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589975.1 | ABCA5-012 | 1095 | 192aa | ENSP00000466931.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000592568.1 | ABCA5-011 | 616 | 127aa | ENSP00000466662.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EMV2 K7EQ50 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588665.1 | ABCA5-009 | 560 | 38aa | ENSP00000467672.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQ50 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000593253.1 | ABCA5-005 | 1695 | 250aa | ENSP00000467524.1 | Non stop decay | K7EMV2 K7EQ50 | - | - | |
| ENST00000587607.1 | ABCA5-002 | 804 | 250aa | ENSP00000467815.1 | Non stop decay | K7EMV2 K7EQ50 | - | - | |
| ENST00000586995.1 | ABCA5-006 | 4062 | 431aa | ENSP00000467251.1 | Nonsense mediated decay | K7EKS9 Q6N017 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000591234.1 | ABCA5-007 | 3263 | 63aa | ENSP00000465766.1 | Nonsense mediated decay | K7EKS9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000589609.1 | ABCA5-010 | 631 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000588106.1 | ABCA5-013 | 1854 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586601.1 | ABCA5-014 | 1149 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
