Description
upstream binding protein 1 (LBP-1a) [Source:HGNC Symbol;Acc:12507]
Gene Synonyms
LBP-1B, LBP-1a, LBP1, LBP1A, LBP1B
Location
Chromosome 3: 33,429,828-33,482,863 reverse strand.
GRCh37:CM000665.1
About this gene
This gene has 13 transcripts (splice variants), 212 orthologues and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000283629.3 | UBP1-001 | 4148 | 540aa | ENSP00000283629.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2659 | C9JWL3 Q9NZI7 | NM_014517.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000447368.2 | UBP1-002 | 3669 | 504aa | ENSP00000395558.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46788 | C9JWL3 Q9NZI7 | NM_001128160.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000283628.5 | UBP1-003 | 2074 | 540aa | ENSP00000283628.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2659 | C9JWL3 Q9NZI7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000456378.1 | UBP1-007 | 581 | 148aa | ENSP00000401614.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JWL3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000411650.1 | UBP1-008 | 859 | 164aa | ENSP00000393842.1 | Nonsense mediated decay | F8WEP8 | - | - | |
| ENST00000486388.1 | UBP1-010 | 928 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467613.1 | UBP1-015 | 659 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481761.1 | UBP1-009 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496310.1 | UBP1-006 | 544 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000492136.1 | UBP1-004 | 7394 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466441.1 | UBP1-005 | 927 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490112.1 | UBP1-014 | 633 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464787.1 | UBP1-011 | 536 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
