Description
protein tyrosine phosphatase, receptor type, R [Source:HGNC Symbol;Acc:9680]
Gene Synonyms
EC-PTP, ECPTP, PCPTP1, PTP-SL, PTPBR7, PTPRQ
Location
Chromosome 12: 71,031,853-71,314,623 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 11 transcripts (splice variants), 194 orthologues and 35 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000283228.2 | PTPRR-001 | 3529 | 657aa | ENSP00000283228.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8998 | F8VVE9 Q15256 Q68CP6 | NM_002849.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000440835.2 | PTPRR-005 | 2818 | 412aa | ENSP00000391750.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44945 | F8VVE9 Q15256 Q68CP6 | NM_130846.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000378778.1 | PTPRR-201 | 2458 | 451aa | ENSP00000368054.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55847 | F8VVE9 Q15256 Q68CP6 | NM_001207016.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000342084.4 | PTPRR-002 | 2037 | 545aa | ENSP00000339605.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55848 | F8VVE9 Q15256 Q68CP6 | NM_001207015.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000549308.1 | PTPRR-004 | 1603 | 412aa | ENSP00000446943.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44945 | F8VVE9 Q15256 Q68CP6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000550661.1 | PTPRR-009 | 1024 | 198aa | ENSP00000449616.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VVE9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551219.1 | PTPRR-006 | 2966 | 141aa | ENSP00000448049.1 | Nonsense mediated decay | F8VU63 | - | - | |
| ENST00000537619.2 | PTPRR-007 | 1927 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547752.1 | PTPRR-008 | 1729 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000548220.1 | PTPRR-003 | 1374 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000549107.1 | PTPRR-010 | 862 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
