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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SYCP2L ENSG00000153157

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Description

synaptonemal complex protein 2-like [Source:HGNC Symbol;Acc:21537]

Gene Synonyms

C6orf177, NO145, dJ62D2.1

Location

Chromosome 6: 10,748,027-10,979,553 forward strand.

GRCh37:CM000668.1

About this gene

This gene has 7 transcripts (splice variants), 118 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283141.6	SYCP2L-001	3130	812aa	ENSP00000283141.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43423	Q5T4T6	NM_001040274.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543878.1	SYCP2L-201	1589	288aa	ENSP00000440676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFB8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000341041.4	SYCP2L-002	3069	291aa	ENSP00000340320.4	Nonsense mediated decay		Q5T4T6	-	-
ENST00000487561.1	SYCP2L-003	644	109aa	ENSP00000417870.1	Nonsense mediated decay		H7C4Q1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465872.1	SYCP2L-005	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488191.1	SYCP2L-006	293	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474197.1	SYCP2L-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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