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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTNAP4 ENSG00000152910

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Description

contactin associated protein-like 4 [Source:HGNC Symbol;Acc:18747]

Gene Synonyms

CASPR4, KIAA1763

Location

Chromosome 16: 76,311,176-76,593,135 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 8 transcripts (splice variants), 122 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000478060.1	CNTNAP4-003	3708	1235aa	ENSP00000418741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10924	H3BPC8 Q9C0A0	NM_138994.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000307431.8	CNTNAP4-201	4857	1307aa	ENSP00000306893.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPC8	NM_033401.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000377504.4	CNTNAP4-202	4713	1259aa	ENSP00000439733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H107 H3BPC8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476707.1	CNTNAP4-005	4355	1311aa	ENSP00000417628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDN6 H3BPC8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000469589.1	CNTNAP4-001	4866	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469667.1	CNTNAP4-004	3782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463177.1	CNTNAP4-006	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471618.1	CNTNAP4-002	2338	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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