Description
protein tyrosine phosphatase, receptor type, O [Source:HGNC Symbol;Acc:9678]
Gene Synonyms
GLEPP1, NPHS6, PTP-OC, PTP-U2, PTP-oc, PTPROT, PTPU2, R-PTP-O
Location
Chromosome 12: 15,475,331-15,750,333 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 12 transcripts (splice variants), 7 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000281171.4 | PTPRO-001 | 5301 | 1216aa | ENSP00000281171.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8675 | B4DS16 Q16827 | NM_030667.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000348962.2 | PTPRO-002 | 5061 | 1188aa | ENSP00000343434.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8674 | B4DS16 Q16827 | NM_002848.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000445537.2 | PTPRO-006 | 4062 | 405aa | ENSP00000393449.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44837 | B4DS16 Q16827 | NM_030671.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000544244.1 | PTPRO-007 | 3978 | 377aa | ENSP00000439234.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53754 | B4DS16 Q16827 | NM_030670.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000442921.2 | PTPRO-004 | 3030 | 405aa | ENSP00000404188.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44837 | B4DS16 Q16827 | NM_030669.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000542557.1 | PTPRO-005 | 2946 | 377aa | ENSP00000437571.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53754 | B4DS16 Q16827 | NM_030668.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000543886.1 | PTPRO-003 | 2070 | 597aa | ENSP00000444173.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IYG3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000535322.1 | PTPRO-012 | 472 | 116aa | ENSP00000446201.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YH60 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000535311.1 | PTPRO-011 | 533 | 88aa | ENSP00000445621.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000544706.1 | PTPRO-010 | 905 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545023.1 | PTPRO-008 | 512 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000538907.1 | PTPRO-009 | 580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
