Description
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:20347]
Gene Synonyms
C14orf133, SPE-39, SPE39, VIPAR, VPS16B, hSPE-39
Location
Chromosome 14: 77,893,018-77,924,295 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 11 transcripts (splice variants), 201 orthologues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000553888.1 | VIPAS39-001 | 2934 | 493aa | ENSP00000452181.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9862 | G3V549 Q6IA61 Q9H9C1 | NM_022067.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000343765.2 | VIPAS39-005 | 2761 | 493aa | ENSP00000339122.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9862 | G3V549 Q6IA61 Q9H9C1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000327028.4 | VIPAS39-201 | 2722 | 480aa | ENSP00000313098.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V549 Q9H9C1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000557658.1 | VIPAS39-003 | 2562 | 493aa | ENSP00000452191.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9862 | G3V549 Q6IA61 Q9H9C1 | NM_001193316.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000556412.1 | VIPAS39-004 | 1832 | 519aa | ENSP00000451857.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4K3 G3V549 Q6IA61 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000448935.2 | VIPAS39-002 | 1623 | 444aa | ENSP00000404815.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53905 | G3V549 Q9H9C1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000557466.1 | VIPAS39-007 | 533 | 45aa | ENSP00000452176.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V549 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556909.1 | VIPAS39-006 | 540 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000553691.1 | VIPAS39-009 | 806 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553576.1 | VIPAS39-011 | 547 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000555854.1 | VIPAS39-010 | 444 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
