Description
glycoprotein M6A [Source:HGNC Symbol;Acc:4460]
Gene Synonyms
GPM6, M6A
Location
Chromosome 4: 176,554,085-176,923,815 reverse strand.
GRCh37:CM000666.1
About this gene
This gene has 21 transcripts (splice variants), 290 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000280187.7 | GPM6A-003 | 2854 | 278aa | ENSP00000280187.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3824 | D6R9T7 D6RAE4 D6RBH3 D6RBM6 D6RD95 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 P51674 Q49AH3 | NM_005277.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000393658.2 | GPM6A-002 | 2821 | 278aa | ENSP00000377268.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3824 | D6R9T7 D6RAE4 D6RBH3 D6RBM6 D6RD95 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 P51674 Q49AH3 | NM_201591.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000506894.1 | GPM6A-001 | 2614 | 267aa | ENSP00000421578.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54822 | D6RAE4 D6RBH3 D6RBM6 D6RD95 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 P51674 Q49AH3 | NM_201592.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000515090.1 | GPM6A-004 | 1500 | 271aa | ENSP00000423984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58936 | D6RAE4 D6RBH3 D6RBM6 D6RD71 D6RD95 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 P51674 Q49AH3 | NM_001261448.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000503397.1 | GPM6A-008 | 737 | 218aa | ENSP00000422959.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9D2 D6RAE4 D6RBH3 D6RBM6 D6RD95 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513365.1 | GPM6A-012 | 734 | 129aa | ENSP00000423122.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9T7 D6RAE4 D6RFY0 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000505561.1 | GPM6A-016 | 690 | 89aa | ENSP00000425409.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RBH3 D6RD95 D6RFY0 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000502754.1 | GPM6A-007 | 616 | 117aa | ENSP00000426821.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RBH3 D6RBM6 D6RD95 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512897.1 | GPM6A-017 | 584 | 43aa | ENSP00000425925.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFY0 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512610.1 | GPM6A-014 | 579 | 119aa | ENSP00000426984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RBH3 D6RBM6 D6RD95 D6RDV7 D6REJ8 D6RFY0 D6RFZ3 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513667.1 | GPM6A-011 | 579 | 98aa | ENSP00000421373.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RBH3 D6RD95 D6RFY0 D6RFZ3 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507540.1 | GPM6A-013 | 568 | 41aa | ENSP00000421407.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFY0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507520.1 | GPM6A-020 | 566 | 105aa | ENSP00000424075.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RBH3 D6RBM6 D6RD95 D6RFY0 D6RFZ3 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512509.1 | GPM6A-006 | 566 | 87aa | ENSP00000424443.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RB41 D6RFY0 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000505375.1 | GPM6A-015 | 561 | 82aa | ENSP00000424125.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RBH3 D6RFY0 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503563.1 | GPM6A-010 | 555 | 10aa | ENSP00000426352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000509865.1 | GPM6A-009 | 551 | 49aa | ENSP00000422712.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE4 D6RFY0 D6RIF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000505304.1 | GPM6A-018 | 550 | 66aa | ENSP00000425463.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD71 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506219.1 | GPM6A-022 | 552 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508323.1 | GPM6A-021 | 543 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000507080.1 | GPM6A-005 | 2672 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
