Description
cadherin 8, type 2 [Source:HGNC Symbol;Acc:1767]
Gene Synonyms
Nbla04261
Location
Chromosome 16: 61,681,146-62,070,939 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 14 transcripts (splice variants), 208 orthologues and 33 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000577390.1 | CDH8-001 | 9721 | 799aa | ENSP00000462701.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10802 | J3KT81 J3KTG8 P55286 | NM_001796.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000577730.1 | CDH8-012 | 8009 | 744aa | ENSP00000462018.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRI5 J3KT81 J3KTG8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000584337.1 | CDH8-003 | 3986 | 532aa | ENSP00000463511.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KT81 J3KTG8 J3QLE6 Q3LID3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000299345.6 | CDH8-013 | 3728 | 745aa | ENSP00000299345.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KT81 J3KTG8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000583382.1 | CDH8-011 | 1528 | 425aa | ENSP00000462976.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KT81 J3KTG8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000584506.1 | CDH8-002 | 559 | 81aa | ENSP00000462847.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KT81 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585315.1 | CDH8-014 | 9076 | 476aa | ENSP00000463266.1 | Nonsense mediated decay | J3KT81 J3KTG8 J3QKW5 | - | - | |
| ENST00000580044.1 | CDH8-008 | 778 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000577228.1 | CDH8-004 | 539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000583483.1 | CDH8-010 | 380 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582980.1 | CDH8-006 | 376 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000577536.1 | CDH8-009 | 324 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582242.1 | CDH8-007 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000584966.1 | CDH8-005 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
