Description
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) [Source:HGNC Symbol;Acc:6153]
Gene Synonyms
CD29, FNRB, GPIIA, MDF2, MSK12, VLA-BETA, VLAB
Location
Chromosome 10: 33,189,247-33,294,720 reverse strand.
GRCh37:CM000672.1
About this gene
This gene has 20 transcripts (splice variants) and 9 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000396033.2 | ITGB1-202 | 3784 | 798aa | ENSP00000379350.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7174 | C9JJP8 C9JPK5 E7EQW5 E7ERX5 E9PLR6 E9PQJ2 P05556 Q5T3E4 Q5T3E5 Q5T3E6 | NM_133376.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000374956.4 | ITGB1-201 | 3758 | 825aa | ENSP00000364094.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 C9JPK5 E7EQW5 E7ERX5 E9PLR6 E9PQJ2 P05556 Q5T3E4 Q5T3E5 Q5T3E6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000423113.1 | ITGB1-203 | 3729 | 801aa | ENSP00000388694.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 C9JPK5 E7EQW5 E7ERX5 E9PLR6 E9PQJ2 P05556 Q5T3E4 Q5T3E5 Q5T3E6 | NM_033668.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000302278.3 | ITGB1-001 | 3640 | 798aa | ENSP00000303351.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7174 | C9JJP8 C9JPK5 E7EQW5 E7ERX5 E9PLR6 E9PQJ2 P05556 Q5T3E4 Q5T3E5 Q5T3E6 | NM_002211.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000488427.1 | ITGB1-005 | 861 | 70aa | ENSP00000417508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000474568.1 | ITGB1-004 | 788 | 98aa | ENSP00000420282.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 C9JPK5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000472147.1 | ITGB1-013 | 668 | 14aa | ENSP00000420416.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000480226.1 | ITGB1-009 | 585 | 163aa | ENSP00000417537.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 C9JPK5 E7EQW5 E7ERX5 E9PLR6 E9PQJ2 Q5T3E4 Q5T3E5 Q5T3E6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000417122.2 | ITGB1-003 | 569 | 89aa | ENSP00000404546.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 Q5T3E4 Q5T3E5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000534049.1 | ITGB1-016 | 562 | 143aa | ENSP00000431326.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 E7ERX5 E9PLR6 E9PQJ2 Q5T3E4 Q5T3E5 Q5T3E6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000475184.1 | ITGB1-012 | 552 | 124aa | ENSP00000417243.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 E7ERX5 E9PQJ2 Q5T3E4 Q5T3E5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000528877.1 | ITGB1-015 | 546 | 104aa | ENSP00000436214.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 E9PQJ2 Q5T3E4 Q5T3E5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000488494.1 | ITGB1-010 | 540 | 152aa | ENSP00000418725.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 E7EUI6 Q5T3E4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000414670.1 | ITGB1-002 | 500 | 49aa | ENSP00000400544.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T3E4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000437302.1 | ITGB1-006 | 445 | 136aa | ENSP00000398029.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 E7ERX5 E9PQJ2 Q5T3E4 Q5T3E5 Q5T3E6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000493758.1 | ITGB1-007 | 366 | 31aa | ENSP00000420792.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJP8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000494395.1 | ITGB1-014 | 562 | 108aa | ENSP00000417799.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000484088.1 | ITGB1-011 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000439974.3 | ITGB1-017 | 580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000464001.1 | ITGB1-008 | 316 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |