Description
chromosome 9 open reading frame 3 [Source:HGNC Symbol;Acc:1361]
Gene Synonyms
AOPEP, AP-O, APO, C90RF3, C9orf3, FLJ14675, ONPEP
Location
Chromosome 9: 97,488,983-97,849,441 forward strand.
GRCh37:CM000671.1
About this gene
This gene has 25 transcripts (splice variants), 221 orthologues and 11 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000375315.2 | C9orf3-201 | 2941 | 819aa | ENSP00000364464.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55328 | B4DKZ8 Q8N6M6 | NM_001193329.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000297979.5 | C9orf3-002 | 2820 | 720aa | ENSP00000297979.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6713 | B4DKZ8 Q8N6M6 | NM_032823.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000428313.1 | C9orf3-008 | 2288 | 601aa | ENSP00000401854.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000277198.2 | C9orf3-004 | 1966 | 566aa | ENSP00000277198.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55327 | B4DKT1 B4DKZ8 Q8N6M6 | NM_001193331.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000424143.1 | C9orf3-006 | 1605 | 508aa | ENSP00000402171.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000433691.2 | C9orf3-204 | 1436 | 160aa | ENSP00000399365.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DU39 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000395357.2 | C9orf3-202 | 942 | 186aa | ENSP00000378763.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DKT1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000445181.1 | C9orf3-015 | 873 | 184aa | ENSP00000413927.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000425634.2 | C9orf3-203 | 867 | 181aa | ENSP00000411815.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DQU3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000427193.1 | C9orf3-003 | 704 | 140aa | ENSP00000387736.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000451893.1 | C9orf3-018 | 514 | 145aa | ENSP00000411451.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000478473.1 | C9orf3-016 | 895 | 180aa | ENSP00000431923.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000473778.1 | C9orf3-009 | 2396 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482056.1 | C9orf3-020 | 1946 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496567.1 | C9orf3-017 | 1575 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488186.1 | C9orf3-012 | 1211 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462125.1 | C9orf3-011 | 961 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000479161.1 | C9orf3-010 | 942 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463372.1 | C9orf3-001 | 919 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468164.1 | C9orf3-007 | 849 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000478603.1 | C9orf3-013 | 802 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489318.1 | C9orf3-021 | 682 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489562.1 | C9orf3-005 | 646 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471978.1 | C9orf3-014 | 478 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000460573.1 | C9orf3-019 | 443 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
