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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MTDH ENSG00000147649

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Description

metadherin [Source:HGNC Symbol;Acc:29608]

Gene Synonyms

3D3, AEG-1, AEG1, LYRIC, LYRIC/3D3

Location

Chromosome 8: 98,656,407-98,740,998 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 6 transcripts (splice variants), 203 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336273.3	MTDH-001	6177	582aa	ENSP00000338235.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6274	Q86UE4	NM_178812.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000519934.1	MTDH-002	2184	526aa	ENSP00000428168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJU9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000522313.1	MTDH-003	672	224aa	ENSP00000428703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521933.1	MTDH-006	565	188aa	ENSP00000429642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBJ8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000519293.1	MTDH-004	629	60aa	ENSP00000429289.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522104.1	MTDH-005	486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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