Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TERF1 ENSG00000147601

.

Description

telomeric repeat binding factor (NIMA-interacting) 1 [Source:HGNC Symbol;Acc:11728]

Gene Synonyms

PIN2, TRBF1, TRF, TRF1, hTRF1-AS, t-TRF1

Location

Chromosome 8: 73,921,099-73,960,357 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 8 transcripts (splice variants), 194 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276603.5	TERF1-001	1677	439aa	ENSP00000276603.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6211	P54274	NM_017489.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000276602.6	TERF1-002	3268	419aa	ENSP00000276602.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6210	P54274	NM_003218.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517390.1	TERF1-006	627	186aa	ENSP00000430121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EWM7 Q5QGN5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518874.1	TERF1-005	516	168aa	ENSP00000428838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFJ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520783.1	TERF1-008	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522018.1	TERF1-007	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518695.2	TERF1-004	3598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518961.1	TERF1-003	3300	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.