Description
homeobox containing 1 [Source:HGNC Symbol;Acc:26137]
Gene Synonyms
FLJ21616, HNF1LA, HOT1, PBHNF
Location
Chromosome 8: 28,747,911-28,922,281 forward strand.
GRCh37:CM000670.1
About this gene
This gene has 18 transcripts (splice variants) and 277 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000397358.3 | HMBOX1-001 | 4082 | 420aa | ENSP00000380516.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6071 | E5RHH9 H0YBM8 Q6NT76 | NM_024567.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000444075.1 | HMBOX1-202 | 3244 | 443aa | ENSP00000401769.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHH9 H0YBM8 Q6NT76 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000287701.10 | HMBOX1-002 | 3184 | 420aa | ENSP00000287701.10 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6071 | E5RHH9 H0YBM8 Q6NT76 | NM_001135726.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000558662.1 | HMBOX1-014 | 1765 | 405aa | ENSP00000453211.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3DSU2 E5RHH9 Q6NT76 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000524238.1 | HMBOX1-006 | 1731 | 443aa | ENSP00000430110.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHH9 H0YBM8 Q6NT76 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000523613.1 | HMBOX1-003 | 1730 | 396aa | ENSP00000452827.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHH9 H0YKJ1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000355231.5 | HMBOX1-017 | 1694 | 386aa | ENSP00000475196.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGZ2 E5RHH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000519047.1 | HMBOX1-005 | 1551 | 386aa | ENSP00000430059.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGZ2 E5RHH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000560599.1 | HMBOX1-015 | 1426 | 364aa | ENSP00000453185.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHH9 H0YLF2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000403668.2 | HMBOX1-201 | 1257 | 304aa | ENSP00000384261.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHH9 Q6NT76 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000519662.1 | HMBOX1-008 | 811 | 118aa | ENSP00000429767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHH9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521516.1 | HMBOX1-004 | 2216 | 304aa | ENSP00000430238.1 | Nonsense mediated decay | E5RHH9 Q6NT76 | - | - | |
| ENST00000522468.1 | HMBOX1-012 | 817 | 45aa | ENSP00000429854.1 | Nonsense mediated decay | H0YBM8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000518080.1 | HMBOX1-009 | 559 | 106aa | ENSP00000430222.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000517386.1 | HMBOX1-010 | 761 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000560269.1 | HMBOX1-011 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000561377.1 | HMBOX1-013 | 307 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000560357.1 | HMBOX1-016 | 979 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
