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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPATA9 ENSG00000145757

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Description

spermatogenesis associated 9 [Source:HGNC Symbol;Acc:22988]

Gene Synonyms

FLJ35906, NYD-SP16

Location

Chromosome 5: 94,987,885-95,034,415 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 7 transcripts (splice variants) and 99 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274432.8	SPATA9-004	1100	254aa	ENSP00000274432.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4076	Q9BWV2	NM_031952.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395899.3	SPATA9-201	510	135aa	ENSP00000379236.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BWV2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000477715.1	SPATA9-003	2169	178aa	ENSP00000427257.1	Nonsense mediated decay		Q9BWV2	-	-
ENST00000316087.8	SPATA9-001	1583	254aa	ENSP00000325491.8	Nonsense mediated decay	CCDS4076	Q9BWV2	-	-
ENST00000489917.1	SPATA9-002	1046	135aa	ENSP00000420883.1	Nonsense mediated decay		Q9BWV2	-	-
ENST00000477047.2	SPATA9-005	1592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000379990.5	SPATA9-006	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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