Description
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:HGNC Symbol;Acc:21614]
Gene Synonyms
NIF3, NLI-IF, NLIIF, SCP1
Location
Chromosome 2: 219,262,979-219,270,664 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 15 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000273062.2 | CTDSP1-001 | 2638 | 261aa | ENSP00000273062.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2416 | Q9GZU7 | NM_182642.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000443891.1 | CTDSP1-002 | 1109 | 260aa | ENSP00000392248.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56166 | Q9GZU7 | NM_001206878.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000428361.1 | CTDSP1-011 | 842 | 262aa | ENSP00000403256.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000452977.1 | CTDSP1-012 | 818 | 254aa | ENSP00000404301.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000431127.1 | CTDSP1-008 | 586 | 195aa | ENSP00000411308.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000488627.1 | CTDSP1-009 | 1118 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000464255.1 | CTDSP1-015 | 926 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473420.1 | CTDSP1-004 | 922 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498160.1 | CTDSP1-005 | 877 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491064.1 | CTDSP1-014 | 786 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000492545.1 | CTDSP1-003 | 634 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496785.1 | CTDSP1-007 | 460 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000497677.1 | CTDSP1-006 | 998 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482272.1 | CTDSP1-010 | 984 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494067.1 | CTDSP1-013 | 362 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
