Description
Meis homeobox 1 [Source:HGNC Symbol;Acc:7000]
Location
Chromosome 2: 66,660,584-66,801,001 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 19 transcripts (splice variants), 250 orthologues, 13 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000272369.9 | MEIS1-001 | 4291 | 390aa | ENSP00000272369.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46309 | O00470 Q53R57 Q53RD5 Q8IZZ2 | NM_002398.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000488550.1 | MEIS1-002 | 5111 | 378aa | ENSP00000475161.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q53R57 Q53RD5 U3KPR8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000407092.2 | MEIS1-201 | 3084 | 465aa | ENSP00000384461.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W8U3 Q53R57 Q53RD5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000560281.2 | MEIS1-017 | 2773 | 370aa | ENSP00000454209.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNY8 Q53R57 Q53RD5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000398506.2 | MEIS1-003 | 2659 | 463aa | ENSP00000381518.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00470 Q53R57 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000495021.2 | MEIS1-016 | 1913 | 325aa | ENSP00000440571.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYS8 Q53R57 Q8IZZ2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000444274.2 | MEIS1-202 | 1499 | 220aa | ENSP00000403206.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z4T5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000606455.1 | MEIS1-018 | 564 | 160aa | ENSP00000475982.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q53R57 U3KQK9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000450027.1 | MEIS1-014 | 558 | 186aa | ENSP00000395827.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q53R57 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000437869.1 | MEIS1-006 | 363 | 121aa | ENSP00000397418.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000491706.1 | MEIS1-008 | 1900 | 96aa | ENSP00000475875.1 | Nonsense mediated decay | U3KQH3 | - | - | |
| ENST00000475239.1 | MEIS1-012 | 573 | 61aa | ENSP00000475692.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000542964.1 | MEIS1-015 | 553 | 48aa | ENSP00000475222.1 | Nonsense mediated decay | U3KPU2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000409622.1 | MEIS1-010 | 551 | 4aa | ENSP00000386514.2 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000466811.1 | MEIS1-011 | 526 | 28aa | ENSP00000476169.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000409517.1 | MEIS1-013 | 579 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000490726.1 | MEIS1-005 | 474 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496248.1 | MEIS1-009 | 468 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498705.1 | MEIS1-007 | 532 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
