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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP6V1C2 ENSG00000143882

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Description

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 [Source:HGNC Symbol;Acc:18264]

Gene Synonyms

ATP6C2, VMA5

Location

Chromosome 2: 10,861,775-10,925,236 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272238.4	ATP6V1C2-002	1565	427aa	ENSP00000272238.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42653	Q8NEY4	NM_001039362.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381661.3	ATP6V1C2-001	3102	381aa	ENSP00000371077.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1674	Q8NEY4	NM_144583.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000480289.1	ATP6V1C2-003	385	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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