Human (GRCh37.p13)
Description

protein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:9659]

Gene Synonyms

BPTP-4, HEPTP, LC-PTP, LPTP, PTPNI

Location

Chromosome 1: 202,116,141-202,130,716 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 21 transcripts (splice variants) and 7 paralogues.

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  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000309017.3PTPN7-0013765465aa
 
Protein coding
CCDS1423B4DDG6 B4DX06 C9JBA9
E7EUM0 E9PE54
NM_002832.3Ensembl CanonicalGENCODE Basic
ENST00000367279.4PTPN7-0033265399aa
 
Protein coding
CCDS1422B4DDG6 B4DX06 C9JBA9
E7EUM0 E9PE54 P35236
NM_080588.2GENCODE Basic
ENST00000308986.5PTPN7-2012805360aa
 
Protein coding
B4DDG6 B4DX06 C9JBA9
E7EUM0 E9PE54 P35236
-GENCODE Basic
ENST00000477554.1PTPN7-0051432441aa
 
Protein coding
B4DDG6 B4DX06 B4DZD9
C9JBA9 E7EUM0 E9PE54
J3KR55
-CDS 5' incomplete
ENST00000543735.1PTPN7-2021189189aa
 
Protein coding
B4DDG6 B4DX06 -GENCODE Basic
ENST00000544762.1PTPN7-2031147136aa
 
Protein coding
B4DX06 -GENCODE Basic
ENST00000477625.1PTPN7-013673225aa
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000467283.1PTPN7-017577153aa
 
Protein coding
C9IYI6 C9JBA9 -CDS 3' incomplete
ENST00000435759.2PTPN7-015575153aa
 
Protein coding
C9JAW7 -CDS 3' incomplete
ENST00000492451.1PTPN7-012560102aa
 
Protein coding
C9JBA9 -CDS 3' incomplete
ENST00000486116.1PTPN7-016551140aa
 
Protein coding
C9JBA9 E9PE54 -CDS 3' incomplete
ENST00000476061.1PTPN7-020550183aa
 
Protein coding
H7C5I3 -CDS 5' and 3' incomplete
ENST00000464870.1PTPN7-018542154aa
 
Protein coding
C9JBA9 E7EUM0 E9PE54
-CDS 3' incomplete
ENST00000495688.1PTPN7-0112689360aa
 
Nonsense mediated decay
B4DDG6 B4DX06 C9JBA9
E7EUM0 E9PE54 P35236
--
ENST00000496197.1PTPN7-0091463140aa
 
Nonsense mediated decay
F8WF08 --
ENST00000480836.1PTPN7-007118976aa
 
Nonsense mediated decay
F8WEY3 --
ENST00000462815.1PTPN7-0101147116aa
 
Nonsense mediated decay
C9JBA9 F8WF66 --
ENST00000492977.1PTPN7-0041595No protein
 
Processed transcript
---
ENST00000479092.1PTPN7-014545No protein
 
Processed transcript
---
ENST00000468385.1PTPN7-0081061No protein
 
Retained intron
---
ENST00000491584.1PTPN7-019573No protein
 
Retained intron
---
Name

PTPN7 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: P35236

CCDS

This gene is a member of the Human CCDS set: CCDS1422.1, CCDS1423.2

Ensembl version

ENSG00000143851.11

Other assemblies

This gene maps to 202,147,013-202,161,588 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000035931 (version 5)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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