Description
solute carrier family 39 (zinc transporter), member 1 [Source:HGNC Symbol;Acc:12876]
Gene Synonyms
IRT1, ZIP1, ZIRTL
Location
Chromosome 1: 153,931,575-153,940,188 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 9 transcripts (splice variants), 187 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000368623.3 | SLC39A1-002 | 2723 | 324aa | ENSP00000357612.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1055 | B4DNN0 Q5T4K2 Q5T4K3 Q5T4K4 Q9NY26 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000310483.6 | SLC39A1-003 | 2427 | 324aa | ENSP00000309710.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1055 | B4DNN0 Q5T4K2 Q5T4K3 Q5T4K4 Q9NY26 | NM_014437.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000368621.1 | SLC39A1-004 | 2398 | 324aa | ENSP00000357610.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1055 | B4DNN0 Q5T4K2 Q5T4K3 Q5T4K4 Q9NY26 | NM_001271959.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356205.4 | SLC39A1-001 | 2084 | 324aa | ENSP00000348535.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1055 | B4DNN0 Q5T4K2 Q5T4K3 Q5T4K4 Q9NY26 | NM_001271958.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537590.1 | SLC39A1-201 | 1409 | 222aa | ENSP00000443632.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDY7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000429040.1 | SLC39A1-006 | 1141 | 321aa | ENSP00000392950.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T4K2 Q5T4K3 Q5T4K4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000413622.1 | SLC39A1-005 | 1030 | 240aa | ENSP00000392229.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T4K2 Q5T4K4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000417348.1 | SLC39A1-008 | 912 | 206aa | ENSP00000407717.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T4K2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000461071.1 | SLC39A1-007 | 529 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
