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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: POGK ENSG00000143157

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Description

pogo transposable element with KRAB domain [Source:HGNC Symbol;Acc:18800]

Gene Synonyms

BASS2, KIAA1513, KIAA15131, KRBOX2, LST003

Location

Chromosome 1: 166,808,681-166,825,581 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants), 184 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367875.1	POGK-003	6254	609aa	ENSP00000356849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1254	Q5TIJ2 Q9P215	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367876.4	POGK-001	5754	609aa	ENSP00000356850.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1254	Q5TIJ2 Q9P215	NM_017542.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537173.1	POGK-202	2357	491aa	ENSP00000442763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1P0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536514.1	POGK-201	2168	524aa	ENSP00000441187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DS22	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000449930.1	POGK-002	954	209aa	ENSP00000404402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TIJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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