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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATHL1 ENSG00000142102

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Description

ATH1, acid trehalase-like 1 (yeast) [Source:HGNC Symbol;Acc:26210]

Gene Synonyms

FLJ22635

Location

Chromosome 11: 289,135-296,107 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 8 transcripts (splice variants) and 189 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409548.2	ATHL1-004	3687	737aa	ENSP00000387185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31322	Q32M88	NM_025092.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409479.1	ATHL1-002	3062	764aa	ENSP00000387099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMA9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409655.1	ATHL1-001	2963	489aa	ENSP00000386297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ60	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397660.3	ATHL1-008	578	193aa	ENSP00000380780.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000482937.2	ATHL1-007	734	203aa	ENSP00000431881.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474221.1	ATHL1-003	4418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476372.1	ATHL1-005	2879	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529087.1	ATHL1-006	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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