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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZCCHC2 ENSG00000141664

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Description

zinc finger, CCHC domain containing 2 [Source:HGNC Symbol;Acc:22916]

Gene Synonyms

C18orf49, FLJ20222, FLJ20281, KIAA1744

Location

Chromosome 18: 60,190,240-60,254,942 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 10 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269499.5	ZCCHC2-005	5959	1178aa	ENSP00000269499.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45880	B2RPG6 K7ERQ9 Q9C0B9	NM_017742.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000586834.1	ZCCHC2-004	4765	857aa	ENSP00000464791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2RPG6 K7ERQ9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588676.1	ZCCHC2-006	1877	378aa	ENSP00000465548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585873.1	ZCCHC2-001	5652	1098aa	ENSP00000468789.1	Nonsense mediated decay		B2RPG6 K7ERQ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591145.1	ZCCHC2-010	673	106aa	ENSP00000468368.1	Nonsense mediated decay		K7ERQ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590840.1	ZCCHC2-011	2376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591632.1	ZCCHC2-002	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587612.1	ZCCHC2-009	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585949.1	ZCCHC2-007	2429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591435.1	ZCCHC2-008	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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