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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C18orf21 ENSG00000141428

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Description

chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:28802]

Gene Synonyms

HsT3108, PNAS-124, PNAS-131, XTP13

Location

Chromosome 18: 33,552,046-33,559,241 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 6 transcripts (splice variants) and 192 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000592875.1	C18orf21-001	1581	220aa	ENSP00000465517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11916	K7EM84 L7N2F3 Q32NC0	NM_031446.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000333234.5	C18orf21-002	958	132aa	ENSP00000329492.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56064	K7EM84 L7N2F3	NM_001201475.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000269194.6	C18orf21-004	703	110aa	ENSP00000269194.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM84 L7N2F3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587873.1	C18orf21-005	656	88aa	ENSP00000466400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593210.1	C18orf21-006	185	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587719.1	C18orf21-003	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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