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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC39A6 ENSG00000141424

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Description

solute carrier family 39 (zinc transporter), member 6 [Source:HGNC Symbol;Acc:18607]

Gene Synonyms

LIV-1, LIV1, ZIP6

Location

Chromosome 18: 33,688,495-33,709,348 reverse strand.

GRCh37:CM000680.1

About this gene

This gene has 4 transcripts (splice variants), 208 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269187.5	SLC39A6-002	3543	755aa	ENSP00000269187.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42428	K7EQ91 Q13433	NM_012319.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590986.1	SLC39A6-004	3003	755aa	ENSP00000465915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42428	K7EQ91 Q13433	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440549.2	SLC39A6-001	1657	433aa	ENSP00000401139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45854	K7EQ91 Q13433	NM_001099406.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000586829.1	SLC39A6-005	823	273aa	ENSP00000467724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQ91	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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