Description
target of myb1 (chicken)-like 1 [Source:HGNC Symbol;Acc:11983]
Gene Synonyms
OK/KNS-CL.3, SRCASM
Location
Chromosome 17: 52,976,748-53,039,310 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 24 transcripts (splice variants) and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000575882.1 | TOM1L1-001 | 2500 | 476aa | ENSP00000460823.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11582 | B7Z9E2 I3L1Q1 I3L4N3 O75674 | NM_005486.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000570371.1 | TOM1L1-022 | 2442 | 346aa | ENSP00000458553.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Q1 I3L4N3 Q8N749 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000572405.1 | TOM1L1-004 | 2337 | 225aa | ENSP00000460721.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Q1 I3L3T4 I3L4N3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000445275.2 | TOM1L1-002 | 2228 | 465aa | ENSP00000408958.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Q1 I3L4N3 J3KQU4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000348161.4 | TOM1L1-005 | 1895 | 399aa | ENSP00000343901.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z9E2 I3L1Q1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000575333.1 | TOM1L1-009 | 1849 | 346aa | ENSP00000458918.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Q1 I3L4N3 Q8N749 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540336.1 | TOM1L1-201 | 1526 | 364aa | ENSP00000441242.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DUW5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536554.1 | TOM1L1-008 | 1522 | 399aa | ENSP00000443099.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z9E2 I3L1Q1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000572158.1 | TOM1L1-007 | 1521 | 469aa | ENSP00000461284.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4I4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000572576.1 | TOM1L1-014 | 754 | 252aa | ENSP00000458809.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000575909.1 | TOM1L1-016 | 708 | 229aa | ENSP00000460213.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Q1 I3L367 I3L4N3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570499.1 | TOM1L1-013 | 596 | 199aa | ENSP00000461215.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4N3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000572298.1 | TOM1L1-011 | 567 | 106aa | ENSP00000459003.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Q1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573607.1 | TOM1L1-015 | 556 | 122aa | ENSP00000461396.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4N3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000574318.1 | TOM1L1-023 | 552 | 125aa | ENSP00000467227.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000571319.1 | TOM1L1-006 | 1524 | 63aa | ENSP00000458219.1 | Nonsense mediated decay | I3L0N2 | - | - | |
| ENST00000576932.1 | TOM1L1-003 | 1252 | 326aa | ENSP00000461876.1 | Nonsense mediated decay | I3L1Q1 I3NI44 | - | - | |
| ENST00000570965.1 | TOM1L1-010 | 1026 | 38aa | ENSP00000459079.1 | Nonsense mediated decay | I3L1T2 | - | - | |
| ENST00000572360.1 | TOM1L1-012 | 576 | 92aa | ENSP00000460565.1 | Nonsense mediated decay | I3L3M3 | - | - | |
| ENST00000574744.1 | TOM1L1-020 | 559 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000574653.1 | TOM1L1-019 | 721 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570623.1 | TOM1L1-018 | 673 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570977.1 | TOM1L1-017 | 584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572905.1 | TOM1L1-021 | 537 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
