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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCTP ENSG00000141179

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Description

phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:8752]

Gene Synonyms

PC-TP, STARD2

Location

Chromosome 17: 53,828,340-53,920,191 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 8 transcripts (splice variants), 216 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268896.5	PCTP-001	2044	214aa	ENSP00000268896.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11588	Q549N3 Q9UKL6	NM_021213.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000576183.1	PCTP-006	2680	203aa	ENSP00000459793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2M9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000325214.6	PCTP-004	1856	142aa	ENSP00000325181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45741	Q9UKL6	NM_001102402.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000573500.1	PCTP-008	919	219aa	ENSP00000460437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3H0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000572536.1	PCTP-010	647	146aa	ENSP00000461676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4Z8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000417982.2	PCTP-003	2234	64aa	ENSP00000415185.2	Nonsense mediated decay		J3QT99	-	-
ENST00000576221.1	PCTP-009	609	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571489.1	PCTP-005	3932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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