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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HAPLN3 ENSG00000140511

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Description

hyaluronan and proteoglycan link protein 3 [Source:HGNC Symbol;Acc:21446]

Gene Synonyms

EXLD1, HsT19883

Location

Chromosome 15: 89,420,519-89,438,857 reverse strand.

GRCh37:CM000677.1

About this gene

This gene has 5 transcripts (splice variants), 234 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359595.3	HAPLN3-001	1980	360aa	ENSP00000352606.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10346	Q96S86	NM_178232.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000562889.1	HAPLN3-003	1547	422aa	ENSP00000457180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTH8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000562281.1	HAPLN3-004	801	226aa	ENSP00000456985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT26	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558770.1	HAPLN3-002	3071	186aa	ENSP00000456458.1	Nonsense mediated decay		H3BRY4	-	-
ENST00000563808.1	HAPLN3-005	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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