Description
neuro-oncological ventral antigen 1 [Source:HGNC Symbol;Acc:7886]
Gene Synonyms
Nova-1
Location
Chromosome 14: 26,912,299-27,066,960 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 14 transcripts (splice variants), 294 orthologues and 12 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000539517.2 | NOVA1-003 | 3912 | 507aa | ENSP00000438875.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32061 | B7Z770 F8VW64 P51513 | NM_002515.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000465357.2 | NOVA1-002 | 3573 | 483aa | ENSP00000447391.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32060 | G8JLA5 P51513 | NM_006489.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000267422.7 | NOVA1-201 | 2021 | 385aa | ENSP00000267422.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z770 F8VW64 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000574031.1 | NOVA1-013 | 1431 | 152aa | ENSP00000459545.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L2B5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000549571.1 | NOVA1-006 | 1005 | 173aa | ENSP00000449185.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWX1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449198.2 | NOVA1-007 | 959 | 277aa | ENSP00000408914.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VW64 J3KQU3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547619.1 | NOVA1-010 | 947 | 211aa | ENSP00000448157.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W659 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000344429.5 | NOVA1-001 | 896 | 181aa | ENSP00000342387.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9635 | P51513 | NM_006491.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000549146.1 | NOVA1-008 | 592 | 96aa | ENSP00000449113.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VW64 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000347476.6 | NOVA1-012 | 549 | 109aa | ENSP00000299472.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G8JLA5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000483536.2 | NOVA1-004 | 6575 | 121aa | ENSP00000448956.1 | Nonsense mediated decay | F8VYI3 H0YHZ1 | - | - | |
| ENST00000546546.1 | NOVA1-011 | 563 | 49aa | ENSP00000448144.1 | Nonsense mediated decay | H0YHZ1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000551754.1 | NOVA1-005 | 488 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547415.1 | NOVA1-009 | 500 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
