Description
TAR (HIV-1) RNA binding protein 2 [Source:HGNC Symbol;Acc:11569]
Gene Synonyms
LOQS, TRBP, TRBP1, TRBP2
Location
Chromosome 12: 53,894,705-53,900,215 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 20 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000266987.2 | TARBP2-001 | 1867 | 366aa | ENSP00000266987.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8861 | H3BV98 Q15633 | NM_134323.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000394357.2 | TARBP2-009 | 1402 | 345aa | ENSP00000377885.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41791 | H3BV98 Q15633 | NM_134324.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000456234.2 | TARBP2-006 | 1368 | 345aa | ENSP00000416077.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41791 | H3BV98 Q15633 | NM_004178.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000550407.1 | TARBP2-016 | 1132 | 227aa | ENSP00000447767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000552857.1 | TARBP2-021 | 916 | 165aa | ENSP00000449537.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VW32 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000552817.1 | TARBP2-011 | 668 | 160aa | ENSP00000458011.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BV98 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550147.1 | TARBP2-004 | 1855 | 113aa | ENSP00000450320.1 | Nonsense mediated decay | F8VP94 F8VYK6 F8VZZ7 | - | - | |
| ENST00000549572.1 | TARBP2-007 | 1514 | 187aa | ENSP00000448948.1 | Nonsense mediated decay | F8VYK3 | - | - | |
| ENST00000548971.1 | TARBP2-005 | 1493 | 94aa | ENSP00000447993.1 | Nonsense mediated decay | F8VTT7 | - | - | |
| ENST00000549679.1 | TARBP2-008 | 1466 | 88aa | ENSP00000448943.1 | Nonsense mediated decay | F8VYK6 | - | - | |
| ENST00000551741.1 | TARBP2-022 | 992 | 92aa | ENSP00000447262.1 | Nonsense mediated decay | F8VYK6 F8VZZ7 | - | - | |
| ENST00000547064.1 | TARBP2-015 | 759 | 31aa | ENSP00000448199.1 | Nonsense mediated decay | F8VSA1 | - | - | |
| ENST00000549028.1 | TARBP2-020 | 557 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000549610.1 | TARBP2-002 | 1116 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546889.1 | TARBP2-003 | 1063 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551157.2 | TARBP2-017 | 1008 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552650.1 | TARBP2-012 | 954 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546763.1 | TARBP2-018 | 846 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547388.1 | TARBP2-010 | 576 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547541.1 | TARBP2-013 | 430 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
