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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SNRPF ENSG00000139343

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Description

small nuclear ribonucleoprotein polypeptide F [Source:HGNC Symbol;Acc:11162]

Gene Synonyms

PBSCF, SMF, Sm-F, snRNP-F

Location

Chromosome 12: 96,252,706-96,297,606 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266735.5	SNRPF-001	1389	86aa	ENSP00000266735.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9055	P62306	NM_003095.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000552085.1	SNRPF-004	815	127aa	ENSP00000447127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0W6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000553192.1	SNRPF-003	552	67aa	ENSP00000447751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000551316.1	SNRPF-002	787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549580.1	SNRPF-005	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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