Description
SR-related CTD-associated factor 11 [Source:HGNC Symbol;Acc:10784]
Gene Synonyms
CASP11, SFRS2IP, SIP1, SRRP129, SRSF2IP
Location
Chromosome 12: 46,312,914-46,385,903 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 16 transcripts (splice variants), 201 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000369367.3 | SCAF11-001 | 5265 | 1463aa | ENSP00000358374.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8748 | F8VXG7 Q99590 | NM_004719.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000465950.1 | SCAF11-004 | 5296 | 1148aa | ENSP00000449812.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q99590 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000419565.2 | SCAF11-201 | 4649 | 1463aa | ENSP00000413036.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8748 | F8VXG7 Q99590 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000549162.1 | SCAF11-009 | 3934 | 1271aa | ENSP00000448864.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXG7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000266589.6 | SCAF11-002 | 2084 | 117aa | ENSP00000266589.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W6K1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000395454.2 | SCAF11-003 | 1931 | 77aa | ENSP00000378840.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MUK0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000395453.2 | SCAF11-005 | 1336 | 77aa | ENSP00000378839.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MTP4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000547018.1 | SCAF11-008 | 3271 | 935aa | ENSP00000446746.1 | Non stop decay | - | - | - | |
| ENST00000550629.1 | SCAF11-010 | 579 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000484275.1 | SCAF11-007 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547654.1 | SCAF11-011 | 416 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474828.1 | SCAF11-006 | 757 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546534.1 | SCAF11-015 | 705 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547950.1 | SCAF11-013 | 697 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550893.1 | SCAF11-012 | 447 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551391.1 | SCAF11-014 | 324 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
