Description
calsyntenin 3 [Source:HGNC Symbol;Acc:18371]
Gene Synonyms
CDHR14, CS3, CSTN3, KIAA0726, alcbeta
Location
Chromosome 12: 7,282,294-7,311,541 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 16 transcripts (splice variants), 202 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000266546.6 | CLSTN3-001 | 4185 | 956aa | ENSP00000266546.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8575 | F5H172 F5H5C6 F5H5D7 F5H7C7 Q9BQT9 | NM_014718.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537408.1 | CLSTN3-002 | 4296 | 968aa | ENSP00000440679.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5C6 F5H5D7 F5H7C7 Q9BQT9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000541953.1 | CLSTN3-004 | 570 | 134aa | ENSP00000443959.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H172 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539982.1 | CLSTN3-009 | 570 | 176aa | ENSP00000442801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5C6 F5H5D7 F5H746 F5H7C7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534830.1 | CLSTN3-008 | 547 | 154aa | ENSP00000443490.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5C6 F5H5D7 F5H7C7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000545663.1 | CLSTN3-006 | 533 | 142aa | ENSP00000442612.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D7 F5H7C7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535452.1 | CLSTN3-007 | 533 | 129aa | ENSP00000443468.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000331148.5 | CLSTN3-003 | 2288 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535313.1 | CLSTN3-015 | 787 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000541667.1 | CLSTN3-005 | 671 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535668.1 | CLSTN3-016 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000544584.1 | CLSTN3-012 | 546 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000540931.1 | CLSTN3-011 | 910 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538933.1 | CLSTN3-010 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000541770.1 | CLSTN3-013 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000542663.1 | CLSTN3-014 | 390 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
