Description
La ribonucleoprotein domain family, member 1B [Source:HGNC Symbol;Acc:24704]
Gene Synonyms
DKFZp434K245, DKFZp686E0316, FLJ10378, LARP2
Location
Chromosome 4: 128,982,423-129,144,086 forward strand.
GRCh37:CM000666.1
About this gene
This gene has 14 transcripts (splice variants), 219 orthologues and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000326639.6 | LARP1B-001 | 4891 | 914aa | ENSP00000321997.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3738 | Q659C4 | NM_018078.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000441387.1 | LARP1B-204 | 3845 | 787aa | ENSP00000396521.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q659C4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000264584.5 | LARP1B-201 | 3778 | 855aa | ENSP00000264584.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RJB0 Q659C4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000512292.1 | LARP1B-005 | 3105 | 518aa | ENSP00000422850.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9W6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000354456.3 | LARP1B-202 | 2720 | 281aa | ENSP00000346444.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q659C4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000432347.2 | LARP1B-004 | 2707 | 358aa | ENSP00000390395.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47133 | G3V0E9 | NM_032239.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394288.3 | LARP1B-003 | 2151 | 335aa | ENSP00000377829.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS64057 | Q659C4 | NM_001278604.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000508819.1 | LARP1B-002 | 1891 | 574aa | ENSP00000427281.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RJB0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000427266.1 | LARP1B-203 | 1819 | 522aa | ENSP00000403586.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47132 | G3XAJ5 | NM_178043.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000507377.1 | LARP1B-006 | 1593 | 491aa | ENSP00000424383.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000507259.1 | LARP1B-007 | 1513 | 25aa | ENSP00000423686.1 | Nonsense mediated decay | H0Y9B4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000506199.1 | LARP1B-010 | 1412 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503725.1 | LARP1B-008 | 1181 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508648.1 | LARP1B-009 | 1104 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
