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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HERC6 ENSG00000138642

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Description

HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 [Source:HGNC Symbol;Acc:26072]

Gene Synonyms

FLJ20637

Location

Chromosome 4: 89,299,891-89,364,263 forward strand.

GRCh37:CM000666.1

About this gene

This gene has 8 transcripts (splice variants), 99 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264346.7	HERC6-001	3779	1022aa	ENSP00000264346.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47098	B3KUG6 Q8IVU3	NM_017912.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380265.5	HERC6-003	3781	986aa	ENSP00000369617.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54777	Q8IVU3	NM_001165136.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000273960.3	HERC6-201	1104	306aa	ENSP00000273960.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IVU3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000502870.1	HERC6-006	557	186aa	ENSP00000425060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000504905.1	HERC6-002	517	73aa	ENSP00000425504.1	Nonsense mediated decay		D6RCT4	-	-
ENST00000506714.1	HERC6-004	2293	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506842.1	HERC6-009	706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515365.1	HERC6-005	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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