Description
sperm specific antigen 2 [Source:HGNC Symbol;Acc:11319]
Gene Synonyms
CS-1, CS1, KIAA1927, KRAP, SPAG13
Location
Chromosome 2: 182,756,560-182,795,465 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 16 transcripts (splice variants), 209 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000431877.2 | SSFA2-001 | 5150 | 1259aa | ENSP00000388731.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46467 | B3KXT1 P28290 | NM_001130445.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000409001.1 | SSFA2-004 | 4987 | 1237aa | ENSP00000387319.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DP45 E7END2 E9PHV5 | NM_001287504.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000320370.7 | SSFA2-002 | 4965 | 1256aa | ENSP00000314669.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2284 | P28290 | NM_006751.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000428267.2 | SSFA2-201 | 3772 | 1084aa | ENSP00000409867.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DP45 E7END2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000409136.1 | SSFA2-009 | 3610 | 768aa | ENSP00000386916.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KXT1 E7EUL7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000451836.1 | SSFA2-017 | 747 | 201aa | ENSP00000387420.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZ26 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000440623.1 | SSFA2-006 | 5420 | 46aa | ENSP00000403754.1 | Nonsense mediated decay | F2Z295 | - | - | |
| ENST00000416081.1 | SSFA2-007 | 5067 | 46aa | ENSP00000415625.1 | Nonsense mediated decay | F2Z295 | - | - | |
| ENST00000454579.1 | SSFA2-005 | 3772 | 46aa | ENSP00000392049.1 | Nonsense mediated decay | F2Z295 | - | - | |
| ENST00000467172.2 | SSFA2-013 | 860 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491866.1 | SSFA2-012 | 718 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470129.1 | SSFA2-011 | 269 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000495248.1 | SSFA2-014 | 219 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491720.1 | SSFA2-008 | 6473 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480753.1 | SSFA2-003 | 2526 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470654.1 | SSFA2-015 | 578 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
