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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM54 ENSG00000138100

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Description

tripartite motif containing 54 [Source:HGNC Symbol;Acc:16008]

Gene Synonyms

MURF, MURF-3, MURF3, RNF30, muRF3

Location

Chromosome 2: 27,505,260-27,530,307 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 4 transcripts (splice variants), 149 orthologues and 80 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296098.4	TRIM54-001	2027	400aa	ENSP00000296098.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1745	Q9BYV2	NM_032546.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380075.2	TRIM54-002	1967	358aa	ENSP00000369415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1746	Q9BYV2	NM_187841.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000485306.1	TRIM54-004	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488321.1	TRIM54-003	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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