Description
solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 [Source:HGNC Symbol;Acc:11041]
Gene Synonyms
SMVT
Location
Chromosome 2: 27,422,455-27,435,826 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 18 transcripts (splice variants), 11 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000310574.3 | SLC5A6-001 | 3231 | 635aa | ENSP00000310208.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1740 | E7EMX0 E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 Q9Y289 | NM_021095.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000408041.1 | SLC5A6-003 | 2230 | 635aa | ENSP00000384853.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1740 | E7EMX0 E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 Q9Y289 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000412471.1 | SLC5A6-004 | 917 | 193aa | ENSP00000403851.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMX0 E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000414408.1 | SLC5A6-005 | 741 | 78aa | ENSP00000404032.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP02 E7EW41 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000401463.1 | SLC5A6-006 | 732 | 147aa | ENSP00000384265.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENG0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000432106.1 | SLC5A6-009 | 725 | 133aa | ENSP00000411536.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENG0 E7EP02 E7ERE1 E7EW41 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426119.1 | SLC5A6-007 | 676 | 115aa | ENSP00000401347.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP02 E7ERE1 E7EW41 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430186.1 | SLC5A6-011 | 599 | 38aa | ENSP00000399299.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428518.1 | SLC5A6-012 | 570 | 58aa | ENSP00000402903.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP02 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000442731.1 | SLC5A6-010 | 542 | 27aa | ENSP00000412115.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000445802.1 | SLC5A6-008 | 871 | 153aa | ENSP00000411361.1 | Nonsense mediated decay | E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 | - | - | |
| ENST00000461319.1 | SLC5A6-017 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488743.2 | SLC5A6-002 | 3174 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461757.1 | SLC5A6-018 | 2307 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476319.1 | SLC5A6-014 | 842 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492069.1 | SLC5A6-015 | 705 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464538.1 | SLC5A6-013 | 664 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481751.1 | SLC5A6-016 | 615 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
