Description
syndecan binding protein (syntenin) [Source:HGNC Symbol;Acc:10662]
Gene Synonyms
MDA-9, MDA9, ST1, SYCL, TACIP18
Location
Chromosome 8: 59,465,483-59,495,419 forward strand.
GRCh37:CM000670.1
About this gene
This gene has 13 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000523483.1 | SDCBP-005 | 3589 | 318aa | ENSP00000428184.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EA09 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000260130.4 | SDCBP-001 | 2167 | 298aa | ENSP00000260130.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6172 | O00560 | NM_005625.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000422546.2 | SDCBP-201 | 2160 | 297aa | ENSP00000391687.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47862 | O00560 | NM_001007070.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000447182.2 | SDCBP-003 | 2103 | 297aa | ENSP00000409288.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47862 | O00560 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000413219.2 | SDCBP-002 | 2086 | 298aa | ENSP00000411771.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6172 | O00560 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000424270.2 | SDCBP-004 | 1277 | 292aa | ENSP00000395351.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47863 | O00560 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000520168.1 | SDCBP-006 | 1097 | 239aa | ENSP00000430730.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DHN5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000447267.2 | SDCBP-012 | 772 | 244aa | ENSP00000397820.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PBU7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000522243.1 | SDCBP-008 | 556 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000519115.1 | SDCBP-013 | 812 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000522843.1 | SDCBP-010 | 764 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000520228.1 | SDCBP-009 | 564 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000523441.1 | SDCBP-011 | 543 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
