Description
synaptotagmin-like 2 [Source:HGNC Symbol;Acc:15585]
Gene Synonyms
CHR11SYT, EXO4, FLJ20163, FLJ21219, KIAA1597, MGC102768, SGA72M, SLP2, SLP2A, exophilin-4
Location
Chromosome 11: 85,405,267-85,522,184 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 30 transcripts (splice variants), 198 orthologues and 31 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000354566.3 | SYTL2-010 | 4751 | 1272aa | ENSP00000346576.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31651 | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | NM_206927.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000359152.5 | SYTL2-201 | 6314 | 1780aa | ENSP00000352065.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK22 E9PRW5 E9PS29 E9PS39 J3KP28 Q9BQS1 | NM_206928.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000525423.1 | SYTL2-008 | 6250 | 1256aa | ENSP00000432694.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31650 | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000316356.4 | SYTL2-004 | 4293 | 935aa | ENSP00000318803.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53689 | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389960.4 | SYTL2-202 | 4275 | 910aa | ENSP00000374610.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31649 | E9PPL3 Q9BQS1 Q9HCH5 | NM_032943.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000528231.1 | SYTL2-007 | 3536 | 934aa | ENSP00000431701.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53688 | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | NM_001162953.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000527523.1 | SYTL2-002 | 3049 | 902aa | ENSP00000434010.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000524452.1 | SYTL2-001 | 2733 | 910aa | ENSP00000435238.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31649 | E9PPL3 Q9BQS1 Q9HCH5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000525702.1 | SYTL2-016 | 2727 | 376aa | ENSP00000432996.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31652 | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | NM_032379.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000530351.1 | SYTL2-012 | 2425 | 651aa | ENSP00000435009.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPL3 H0YE56 Q9BQS1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000389958.3 | SYTL2-011 | 1943 | 365aa | ENSP00000374608.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41698 | Q9BQS1 Q9HCH5 | NM_206930.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000529581.1 | SYTL2-014 | 1910 | 376aa | ENSP00000435855.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31652 | E9PK22 E9PRW5 E9PS29 E9PS39 Q9BQS1 Q9HCH5 | NM_206929.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000533892.1 | SYTL2-015 | 1441 | 336aa | ENSP00000432144.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53687 | E9PPL3 Q9BQS1 Q9HCH5 | NM_001162952.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000526999.1 | SYTL2-029 | 740 | 103aa | ENSP00000434111.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK22 E9PRW5 E9PS39 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529534.1 | SYTL2-019 | 711 | 155aa | ENSP00000432137.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK22 E9PRW5 E9PS29 E9PS39 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533057.1 | SYTL2-020 | 700 | 124aa | ENSP00000436164.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PQL8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527794.1 | SYTL2-018 | 683 | 160aa | ENSP00000437005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPL3 Q9BQS1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524911.1 | SYTL2-030 | 633 | 63aa | ENSP00000432116.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PS39 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533577.1 | SYTL2-024 | 585 | 7aa | ENSP00000434621.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532221.1 | SYTL2-025 | 583 | 69aa | ENSP00000431703.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK22 E9PS39 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000389959.4 | SYTL2-009 | 4931 | 862aa | ENSP00000374609.4 | Nonsense mediated decay | J3KPL9 | - | - | |
| ENST00000532995.1 | SYTL2-013 | 2437 | 100aa | ENSP00000436678.1 | Nonsense mediated decay | E9PIB5 | - | - | |
| ENST00000528566.1 | SYTL2-023 | 556 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000534554.1 | SYTL2-022 | 552 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524830.1 | SYTL2-005 | 497 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530894.1 | SYTL2-031 | 444 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000438197.2 | SYTL2-006 | 1751 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531496.1 | SYTL2-027 | 942 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529662.1 | SYTL2-026 | 783 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525692.1 | SYTL2-028 | 657 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
