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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN11 ENSG00000137225

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Description

calpain 11 [Source:HGNC Symbol;Acc:1478]

Gene Synonyms

calpain11

Location

Chromosome 6: 44,126,548-44,152,139 forward strand.

GRCh37:CM000668.1

About this gene

This gene has 6 transcripts (splice variants) and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398776.1	CAPN11-001	2728	739aa	ENSP00000381758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47436	Q9UMQ6	NM_007058.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542245.1	CAPN11-201	2728	739aa	ENSP00000441078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GX91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532171.1	CAPN11-005	585	182aa	ENSP00000432420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQZ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526118.1	CAPN11-004	565	40aa	ENSP00000431963.1	Nonsense mediated decay		E9PIX3	-	-
ENST00000524554.1	CAPN11-002	1501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533604.1	CAPN11-003	1051	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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