Description
Yip1 domain family, member 3 [Source:HGNC Symbol;Acc:21023]
Gene Synonyms
C6orf109, DKFZp566C243, FinGER3, KLIP1, dJ337H4.3
Location
Chromosome 6: 43,479,565-43,484,728 reverse strand.
GRCh37:CM000668.1
About this gene
This gene has 17 transcripts (splice variants), 199 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000372422.2 | YIPF3-003 | 1576 | 350aa | ENSP00000361499.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4899 | D6RGY8 Q5JTD5 Q9GZM5 | NM_015388.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000506469.1 | YIPF3-012 | 1444 | 356aa | ENSP00000425494.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGY8 E7EQR8 Q5JTD5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000503972.1 | YIPF3-020 | 933 | 262aa | ENSP00000421461.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFI3 D6RGY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000511831.1 | YIPF3-018 | 566 | 109aa | ENSP00000421094.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000500090.2 | YIPF3-017 | 406 | 135aa | ENSP00000423544.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000460547.2 | YIPF3-009 | 1674 | 63aa | ENSP00000421053.1 | Nonsense mediated decay | D6RA04 | - | - | |
| ENST00000510102.1 | YIPF3-001 | 1639 | 63aa | ENSP00000427207.1 | Nonsense mediated decay | D6RA04 | - | - | |
| ENST00000490447.2 | YIPF3-014 | 1321 | 64aa | ENSP00000424629.1 | Nonsense mediated decay | D6RAY4 | - | - | |
| ENST00000416380.2 | YIPF3-004 | 1005 | 63aa | ENSP00000390056.2 | Nonsense mediated decay | D6RA04 | - | - | |
| ENST00000455768.2 | YIPF3-005 | 843 | 45aa | ENSP00000392699.2 | Nonsense mediated decay | D6RBQ1 | - | - | |
| ENST00000514627.1 | YIPF3-019 | 854 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000502714.1 | YIPF3-016 | 795 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000503147.1 | YIPF3-007 | 652 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460903.2 | YIPF3-002 | 605 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000372417.1 | YIPF3-006 | 406 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488966.1 | YIPF3-008 | 337 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000512713.1 | YIPF3-021 | 306 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
