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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CKAP2 ENSG00000136108

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Description

cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:1990]

Gene Synonyms

FLJ10749, LB1, TMAP, se20-10

Location

Chromosome 13: 53,029,564-53,050,763 forward strand.

GRCh37:CM000675.1

About this gene

This gene has 7 transcripts (splice variants), 199 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378037.5	CKAP2-003	3629	683aa	ENSP00000367276.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41893	C9J649 C9J7Y4 Q8WWK9	NM_018204.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000490903.1	CKAP2-004	3395	634aa	ENSP00000417830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66557	C9J649 E9PD90	NM_001286686.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000258607.5	CKAP2-001	3375	682aa	ENSP00000258607.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9435	C9J649 E9PD90 Q8WWK9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000378034.3	CKAP2-002	1972	494aa	ENSP00000367273.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J649 Q8WWK9	NM_001286687.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468284.1	CKAP2-006	579	93aa	ENSP00000418431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J649	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480747.1	CKAP2-005	537	97aa	ENSP00000418224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7Y4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000459902.1	CKAP2-007	798	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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