Description
Rho guanine nucleotide exchange factor (GEF) 4 [Source:HGNC Symbol;Acc:684]
Gene Synonyms
ASEF, ASEF1, GEF4, KIAA1112, STM6
Location
Chromosome 2: 131,594,489-131,804,836 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 16 transcripts (splice variants) and 24 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000326016.5 | ARHGEF4-001 | 3656 | 690aa | ENSP00000316845.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2165 | Q53QF2 Q53TH6 Q9NR80 Q9NTG0 | NM_015320.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000409359.1 | ARHGEF4-003 | 4788 | 1014aa | ENSP00000386794.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EV07 Q53QF2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000392953.3 | ARHGEF4-201 | 4257 | 670aa | ENSP00000376680.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42754 | Q53QF2 Q9NR80 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000525839.1 | ARHGEF4-002 | 3800 | 670aa | ENSP00000432267.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42754 | Q53QF2 Q9NR80 | NM_032995.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000409303.1 | ARHGEF4-005 | 1893 | 630aa | ENSP00000387285.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PEM0 Q53QF2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000355771.3 | ARHGEF4-009 | 1872 | 619aa | ENSP00000348017.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q53TH6 Q9NR80 Q9NTG0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000438985.1 | ARHGEF4-004 | 1638 | 372aa | ENSP00000389661.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4QPB6 H0Y451 Q53QF2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000428230.2 | ARHGEF4-202 | 1638 | 192aa | ENSP00000398455.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4QPB6 Q53QF2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000532720.1 | ARHGEF4-012 | 882 | 287aa | ENSP00000432301.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000439368.2 | ARHGEF4-010 | 901 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496764.2 | ARHGEF4-007 | 840 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528247.1 | ARHGEF4-011 | 662 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000526381.1 | ARHGEF4-008 | 577 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000490728.1 | ARHGEF4-006 | 3229 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525092.1 | ARHGEF4-014 | 769 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527365.1 | ARHGEF4-013 | 499 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
